LANGUAGE MODELING OF BIOLOGICAL DATA
Final Report List of Participants   Workshop Homepage  Accommodations Travel Information  Program
 
Computational Biologists

Christopher Burge
cburge@mit.edu
http://genes.mit.edu/chris
MIT / Dept of Biology
77 Massachusetts Ave., 68-222
Cambridge, MA 02139-4307
telephone: (office)(617)258-5997; (lab) (617) 258-5995
fax: (617) 253-3128

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Ken Dill
dill@maxwell.ucsf.edu
http://www.dillgroup.ucsf.edu
UCSF
3333 California Street, Suite 415
San Francisco, CA 94118
telephone number: 415-476-9964
fax number: 415-502-4222 

Slides PDF


Richard Durbin
rd@sanger.ac.uk
The Sanger Centre Wellcome Trust Genome Campus
Hinxton
Cambs
CB10 1SA
Telephone: +44 (0) 1223 494978
Fax: +44 (0) 1223 494919

Powerpoint GeneStructure HTML
Powerpoint GeneStructure File
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Sean Eddy
http://www.genetics.wustl.edu/eddy/
Howard Hughes Medical Institute
Department of Genetics
Washington University
School of Medicine
660 South Euclid Avenue, Box 8232
Saint Louis, Missouri 63110

Presentation Available in Hard Copy
Power Point Slides These files were generated by scanning hardcopies of the original slides.
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William Grundy
bgrundy@cs.columbia.edu
www.cs.columbia.edu/~bgrundy
Department of Computer Science
Columbia University, MC0401
1214 Amsterdam Avenue
New York, NY 10027
>telephone: 212 939-7114
fax: 212 666-0140

Slides PDF


Ian Holmes
ihh@fruitfly.org
http://www.fruitfly.org/~ihh/
2450 Milvia Street, Apt 15
Berkeley CA 94704-1980

Telephone: (510) 540 6481

Bjarne Knudsen
bk@daimi.au.dk
Department of Genetics and Ecology
The Institute of Biological Sciences
University of Aarhus, Building 540
Ny Munkegade
DK-8000 ÅrhusC
Denmark
telephone: +45-89423334

fax: +45-86127191
Rune Lyngso
rlyngsoe@cse.ucsc.edu
http://www.brics.dk/~rlyngsoe
Department of Computer Science and Engineering
Jack Baskin School of Engineering
University of California
Santa Cruz CA 95064
USA
telephone: AM: 1-831-426-4287; PM: 1-831-459-2118
fax number: 1-831-459-4046

Slide Postscript File


Edward Marcotte
marcotte@icmb.utexas.edu
Department of Chemistry and Biochemistry
Institute of Cell and Molecular Biology, MBB 3.232
University of Texas
2500 Speedway
Austin, TX 78712
telephone: (512) 471-5435
fax: (512) 471-2149

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Elena Rivas
elena@genetics.wustl.edu
http://www.genetics.wustl.edu/eddy/people/elena
Washington University
Box 8232
4566 Scott Avenue
St. Louis, MO 63110 Power Point Slides These files were generated by scanning hardcopies of the original slides.
Power Point html These files were generated using scanning hardcopies of the of original slides.

Andrey Rzhetsky
ar345@columbia.edu
http://genome6.cpmc.columbia.edu/andrey/andrey.html
Columbia Genome Center and Department of Medical Informatics
Columbia University
Russ Berrie Pavilion, Room 121H
1150 St. Nicholas Avenue, Unit 109
New York, NY 10032
Phone:(212) 304-7552
FAX: (212) 304-7398 or (212) 304-5515 

PowerPoint Slides
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Yasuo Uemura
uemura@cl-sciences.co.jp
Celestar Lexico-Sciences, Inc.
MTG-D17, 1-3 Nakase, Mihama-ku,
Chiba 261-8501, Japan
Phone: +81-43-274-5801
Fax: +81-43-274-5817


David Searls
David_B_Searls@sbphrd.com
SmithKline Beecham
709 Swedeland Road
P.O. Box 1539
King of Prussia, PA 19406

Presentation Available in Hard Copy
Power Point Slides These files were generated by scanning hardcopies of the original slides.
Power Point html These files were generated using scanning hardcopies of the of original slides.



Computational Linguists

Srinivas Bangalore
srini@research.att.com
http:www.research.att.com/info/srini
E149, Bldg 103,
180 Park Ave,
Florham Park
NJ 07932
phone: 973-360-7041
fax: 973-360-7010

Bangalore Postscript File
Bangalore PDF File


Michael Brent

brent@cs.wustl.edu
http://www.cs.wustl.edu/~brent
Michael Brent
Department of Computer Science
Washington University
Campus Box 1045
St. Louis, MO 63130


Eric Brill
brill@microsoft.com
http://research.microsoft.com/~brill
Microsoft Research
One Microsoft Way
Redmond, Wa. 98052
Telephone: 425-705-4992
Fax: 425-936-7329


Michael Collins
mcollins@research.att.com
http://www.research.att.com/~mcollins
AT&T Research Labs
50 W 34th Street
Apt 18B6
New York NY 10001
Telephone: 973 360 8349
Fax: 973 360 8970

Collins Postscript File
Collins PDF File


Aravind Joshi
joshi@linc.cis.upenn.edu
IRCS/CIS
400A 3401 Walnut Street
Philadelphia, PA 19104-6228
215-898-0359
215-573-9247

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Kevin Knight
knight@isi.edu
http://www.isi.edu/~knight
4676 Admiralty Way

Marina del Rey, CA, 90292
Telephone Number: 310-448-8716
Fax Number - 310-822-0751


Satoshi Kobayashi
satoshi@cs.uec.ac.jp
Department of Computer Science
University of Electro-Communications
1-5-1, Chofugaoka, Chofu
Tokyo 182-8585, JAPAN
Telephone: +81-424-43-5315
Fax: +81-424-43-5315

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John Lafferty

John_Lafferty@cs.cmu.edu
http://www.cs.cmu.edu/~lafferty
Department of Statistics
University of California
367 Evans Hall #3860
Berkeley, CA 94720-3860
telephone: 510-525-4939
fax: 510-642-7892

Presentation Available in Hard Copy
Power Point Slides These files were generated by scanning hardcopies of the original slides.
Power Point html These files were generated using scanning hardcopies of the of original slides.


Chris Mellish
chrism@dai.ed.ac.uk
http://www.dai.ed.ac.uk/homes/chrism
Division of Informatics
University of Edinburgh
80 South Bridge
Edinburg EH1 1HN
Scotland
Telephone: +44 (0)131-650-2711
Fax: +44 (0)131-650-6516


Partha P. Mitra
pmitra@bell-labs.com
1D-268, 600 Mountain Avenue
Bell Laboratories, Lucent Technologies
Murray Hill, NJ 07974
telephone: 908-582-2446
fax: 908-582-4702

Fernando Pereira
fpereira@whizbang.com
http://homepage.mac.com/fcnpereira/
WhizBang! Labs, East
4616 Henry Street
Pittsburgh, PA 15213
slides.pdf


Stephen Pulman
Stephen.Pulman@linguistics-philology.ox.ac.uk
Professor of General Linguistics
Somerville College, Oxford OX2 6HD
telephone: +44-(0)1865-270633
Sec: -280400
Fax: -280412

Pulman Postscript File
Pulman PDF File


Giorgio Satta
satta@dei.unipd.it
http://www.dei.unipd.it/~satta
Universita` di Padova
Dipartimento di Elettronica e Informatica
via Gradenigo 6/A
35131 Padova, Italy
telephone:+39 (0)49 827 7831
fax:+39 (0)49 827-7826


Local Participants

Peter Buneman
peter@cis.upenn.edu
http://www.cis.upenn.edu/~peter/
Department of Computer and Information Science
University of Pennsylvania
200 South 33rd Street
Philadelphia, PA 19104-6389

telephone:(215) 898 7703
fax: (215) 898-0587

Robin Clark
rclark@babel.ling.upenn.edu
http://www.ling.upenn.edu/~rclark/home.html
Department of Linguistics
University of Pennsylvania
605 Williams Hall
Philadelphia, PA 19104-6305

telephone:(215) 898 2943
fax: (215) 573-2091

Susan B. Davidson
susan@cis.upenn.edu
http://www.cis.upenn.edu/~susan/
Department of Computer and Information Science
University of Pennsylvania
200 South 33rd Street
Philadelphia, PA 19104-6389

tel:(215) 898 3490
fax: (215) 898-0587


Lila Gleitman
gleitman@cattell.psych.upenn.edu
http://www.psych.upenn.edu/~gleitman/
400A 3401 Walnut Street
Philadelphia, PA 19104-6228

Phone:215-898-0360
FAX: 215-573-9247 


Sampath Kannan
kannan@cis.upenn.edu
http://www.cis.upenn.edu/~kannan/
Department of Computer and Information Science
University of Pennsylvania
200 South 33rd Street
Philadelphia, PA 19104-6389

telephone:(215) 898 9514
fax: (215) 898-0587

Anthony Kroch
kroch@linc.cis.upenn.edu
http://www.ling.upenn.edu/~kroch/
Linguistics Department
614 Williams Halls
University of Pennsylvania
Philadelphia, PA 19104

telephone: (215) 898-3212
fax: (215) 573-2091

Mark Liberman
myl@unagi.cis.upenn.edu
http://www.ling.upenn.edu/~myl/
Linguistics Department
University of Pennsylvania
Philadelphia, PA 19104

telephone: 215-898-0363
fax: 215-573-9247

Mitch Marcus
mitch@linc.cis.upenn.edu
http://www.cis.upenn.edu/~mitch
Computer and Information Science Department
University of Pennsylvania
Philadelphia, PA 19104

telephone: 215-898-2538
fax: 215-898-0587

Martha Palmer
mpalmer@cis.upenn.edu
http://www.cis.upenn.edu/~mpalmer/
University of Pennsylvania
CIS Department
200 S. 33rd Street
Philadelphia, PA, 19104

Phone: 215-898-9513
FAX: 215-898-0587 


Don Ringe
dringe@babel.ling.upenn.edu
http://www.cis.upenn.edu/~dringe/home.html
Department of Computer and Information Science
University of Pennsylvania
200 South 33rd Street
Philadelphia, PA 19104-6389

telephone:(215) 898 9514
fax: (215) 898-0587

David S. Roos
droos@sas.upenn.edu
http://www.sas.upenn.edu/biology/faculty/roos/index.html
http://www.sas.upenn.edu/~striepen/rooslab.html
Professor of Biology
Director, Genomics Institute
Burroughs Wellcome Scholar in Molecular Parasitology
305 Goddard Laboratories, University of Pennsylvania
Philadelphia, Pennsylvania 19104-6018 USA

Phone:+1-215-898-2118 (-2120 lab)
Fax:+1-215-898 -8780


Jonathan Schug
jschug@t@pcbi.upenn.edu
http://www.cis.upenn.edu/~jschug
Center for Bioinformatics
University of Pennsylvania
1314 Blockley Hall
422 Curie Boulevard
Philadelphia, PA 19104-6145

Phone: telephone:(215) 573-3113
FAX: 215-573-3111

Other Participants

Dr. Lynette Hirschman
lynette@mitre.org
The MITRE Corporation
202 Burlington Road
Bedford, Massachusetts 01730

Phone: (781) 271-7789
FAX: (781) 271-2352 


Daniel Marcu

marcu@ISI.EDU

http://www.isi.edu/~marcu/

Information Sciences Institute
University of Southern California
4676 Admiralty Way, Suite 1001
Marina del Rey, CA 90292

Telephone: 310-448-8726
Fax: 310-822-0751


Allen Sears
asears@cnri.reston.va.us
CNRI, 1895 Preston White Drive
Reston, VA 20191


Phone: 703-262-5304
FAX:703-620-0913  

Sylvia Spengler
sspengle@nsf.gov
Biological Databases and Informatics
National Science Foundation
4201 Wilson Blvd.
Arlington VA 22230

Telephone: 703-292-8470
fax: 703-292-9063

Gary Strong, Program Manager, ITR
gstrong@nsf.gov
National Science Foundation
4201 Wilson Blvd.
Suite 1160
Arlington, VA 22230
Phone:703 292 4765
K. Vijay-Shanker
vijay@cis.udel.edu
Dept. of Computer and Information Sciences
University of Delaware
Newark, DE 19716

Phone:(302) 831-1952
FAX: (302) 831-4091 


Bonnie Webber
bonnie@dai.ed.ac.uk
Division of Informatics
University of Edinburgh
80 South Bridge
Edinburgh EH1 1HN
SCOTLAND

telephone: 011 44 131 650 2750
fax:

Student/Postdoctoral Participants

Eugen Buehler
buehler@gradine.cis.upenn.edu
http://www.cis.upenn.edu/~buehler
Dept of Computer and Information Science
University of Pennsylvania
200 S 33rd St
Philadelphia PA 19104

telephone: (215) 573-4413
Fax: (215) 898-0587
David Chiang
dchiang@cis.upenn.edu
http://www.cis.upenn.edu/~dchiang
Dept of Computer and Information Science
University of Pennsylvania
200 S 33rd St
Philadelphia PA 19104

telephone: (215) 898-0332
Fax: (215) 573-9247
Mark Dras
madras@linc.cis.upenn.edu
Institute for Research in Cognitive Science
University of Pennsylvania
400A 3401 Walnut Street
Philadelphia, PA 19104-6228

telephone: (215) 898-0365
Fax: (215) 573-9247
Anoop Sarkar
anoop@linc.cis.upenn.edu
http://www.cis.upenn.edu/~anoop
IRCS, University of Pennsylvania
400A 3401 Walnut Street
Philadelphia, PA 19104-6228

telephone: (215) 573-5258
Fax: (215) 573-9247
Andrew Schein
ais@seas.upenn.edu
http://www.cis.upenn.edu/~ais
Dept of Computer and Information Science
University of Pennsylvania
200 S 33rd St
Philadelphia PA 19104

telephone: (215) 898-8560
Fax: (215) 898-0587

Language Modeling of Biological Data
Institute for Research in Cognitive Science
University of Pennsylvania
400A 3401 Walnut Street
Philadelphia, PA 19104-6228
phone: +1-215-898-0357
fax: +1-215-573-9247

last updated: 27 March 2001
If you have any questions or suggestions please send mail to trisha@ircs.upenn.edu


Today's date is Sunday, 18-May-2008 06:43:50 EDT PENN